If you adore the warm, cozy flavors of classic apple pie but want something handheld and perfectly portioned, this Apple Pie Cupcake with Cinnamon Nutmeg Frosting Recipe is exactly what your kitchen needs. These cupcakes capture the tender crumb and sweet-spiced apple goodness of traditional pie, wrapped up in a light vanilla batter and topped with luscious, warmly spiced buttercream that sings with cinnamon and nutmeg. Every bite feels like a comforting hug, ideal for sharing with loved ones or savoring on a quiet afternoon.

Ingredients You’ll Need
The beauty of this Apple Pie Cupcake with Cinnamon Nutmeg Frosting Recipe is in its simplicity and how well each ingredient plays its role. From the fluffy texture given by flour and baking agents to the sweet-tart pop of apple filling and aromatic spices, these components come together effortlessly to create a memorable treat.
- 1 1/4 cups all-purpose flour: Provides the perfect structure to keep cupcakes tender yet sturdy.
- 1 1/4 teaspoons baking powder: Ensures a nice rise so the cupcakes stay light and soft.
- 1/4 teaspoon baking soda: Adds a slight lift and contributes to a better crumb.
- 1/4 teaspoon salt: Balances flavors and enhances sweetness.
- 1/2 teaspoon ground cinnamon: Gives that classic apple pie spice that you know and love.
- 1/2 cup unsalted butter, softened (for batter): Creates rich moisture and fluffy texture in the cupcakes.
- 1 cup granulated sugar: Sweetens the batter without overpowering the delicate spices.
- 2 large eggs: Bind the ingredients and add richness to the cupcakes.
- 1 teaspoon vanilla extract: Enhances overall flavor with warm, fragrant notes.
- 1/2 cup milk: Adds moisture and helps achieve a soft crumb.
- 1 cup apple pie filling, finely chopped: The star of the show, bringing authentic apple pie flavor and chunks of fruit in every bite.
- 1 teaspoon lemon juice: Keeps the apple filling vibrant and fresh-looking.
- 1/2 cup unsalted butter, softened (for frosting): The base for creamy, dreamy cinnamon nutmeg frosting.
- 1 cup confectioners’ sugar: Sweetens and smooths the frosting to irresistible silkiness.
- 1 teaspoon ground cinnamon: Warms up the frosting with that beloved spice note.
- 1/4 teaspoon nutmeg: Adds a lovely depth and subtle nutty aroma.
- 1 tablespoon milk: Helps reach the perfect spreading consistency for frosting.
How to Make Apple Pie Cupcake with Cinnamon Nutmeg Frosting Recipe
Step 1: Prep Your Oven and Pan
Start by preheating your oven to 350°F (175°C). Line your muffin tin with cupcake liners, which makes clean-up easier and keeps your cupcakes looking neat and inviting.
Step 2: Mix Dry Ingredients
In a medium bowl, whisk together the flour, baking powder, baking soda, salt, and ground cinnamon. This blend not only ensures your cupcakes rise beautifully but also infuses that signature apple pie spicy warmth right throughout the batter.
Step 3: Cream Butter and Sugar
Using an electric mixer, beat half a cup of softened butter and the granulated sugar until light, fluffy, and pale in color. This step is crucial because it introduces air, contributing to those tender, lofty cupcakes you are aiming for.
Step 4: Add Eggs and Vanilla
Incorporate the eggs one at a time, making sure each is fully blended before adding the next, then stir in the vanilla extract for a fragrant foundation that complements the apple filling beautifully.
Step 5: Combine Dry and Wet Ingredients
Alternately add the flour mixture and milk to the butter mixture, starting and ending with the flour. Mix gently until just combined. This careful mixing keeps the cupcakes tender without overworking the batter.
Step 6: Prepare the Apple Filling
In a small bowl, toss the finely chopped apple pie filling with lemon juice. The lemon not only enhances the flavor but also keeps those apple pieces from browning, ensuring a fresh look and taste.
Step 7: Assemble the Cupcakes
Fill each cupcake liner about two-thirds full with the batter, then add a spoonful of the apple pie filling on top. The surprise of apple in each cupcake makes it extra special.
Step 8: Bake Until Golden
Bake for 18-20 minutes, or until a toothpick inserted into the center comes out clean. Let the cupcakes rest in the pan for 5 minutes before moving them to a wire rack to cool completely — patience here makes for frosting success!
Step 9: Make the Frosting
Beat the softened butter until creamy, then gradually add the confectioners’ sugar, ground cinnamon, and nutmeg. Beat in the milk until the frosting is smooth and spreadable, bursting with warm spice flavors that pair perfectly with the apple cupcakes.
Step 10: Frost and Finish
Once your cupcakes are completely cool, spread a generous layer of the cinnamon nutmeg buttercream over each one. If you want, you can add a slice of fresh apple or a sprinkle of extra cinnamon on top for that finishing touch.
How to Serve Apple Pie Cupcake with Cinnamon Nutmeg Frosting Recipe

Garnishes
A thin slice of apple or a dusting of cinnamon on top of each frosted cupcake adds charm and a hint of freshness. You could also sprinkle finely chopped toasted pecans for a crunchy surprise that complements the soft cupcake perfectly.
Side Dishes
Serve these cupcakes with a scoop of vanilla ice cream or a dollop of whipped cream to elevate the experience. A cup of hot apple cider or chai tea also pairs wonderfully to echo those cozy spices.
Creative Ways to Present
The cupcakes lend themselves well to seasonal celebrations—try arranging them on a rustic wooden board for a fall gathering or decorating with autumn leaves and mini pumpkins for festive flair. You can even pack them individually in pretty boxes for thoughtful homemade gifts.
Make Ahead and Storage
Storing Leftovers
Keep leftover Apple Pie Cupcakes with Cinnamon Nutmeg Frosting Recipe in an airtight container at room temperature for up to two days. For longer storage, refrigerating is best to maintain freshness, though frosting may firm up slightly in the fridge.
Freezing
You can freeze unfrosted cupcakes by wrapping them tightly in plastic wrap and placing them in a freezer bag for up to three months. Frost after thawing for best texture and flavor. Alternatively, freeze already frosted cupcakes if you use a slightly sturdier buttercream.
Reheating
If you want that fresh-baked warmth, microwave a cupcake (minus the frosting) for about 10 seconds or warm them in the oven at 300°F for 5 minutes. Adding frosting afterward keeps the buttercream from melting too much.
FAQs
Can I use fresh apples instead of pie filling?
Absolutely! Just peel, core, and finely chop fresh apples, then toss them with cinnamon, sugar, and a bit of lemon juice before adding to the cupcakes. You might want to sauté them briefly to soften and release the flavors before using.
Is it possible to make these cupcakes dairy-free?
Yes, substitute dairy butter with a plant-based alternative and use almond milk or oat milk instead of regular milk. The texture may be slightly different but still delicious and moist.
How long do these cupcakes stay fresh?
When stored properly in an airtight container, these cupcakes are best enjoyed within three days for peak freshness. Beyond that, they can dry out or the frosting can lose its texture.
Can I double the recipe for a larger batch?
Definitely. Just be sure to use a larger muffin tin or multiple tins, and watch the baking time closely, as it might vary slightly with batch size.
What can I do if I don’t have a mixer?
Mix the batter by hand using a whisk or wooden spoon. It will take a little extra muscle to cream the butter and sugar, but it’s completely doable and will still yield lovely cupcakes!
Final Thoughts
There is something incredibly joyful about baking these Apple Pie Cupcakes with Cinnamon Nutmeg Frosting Recipe. They bring together the nostalgic flavors of autumn in an approachable, delightful form that your friends and family will thank you for. So, roll up your sleeves and make this recipe your next sweet celebration—you’re going to love the hugs of spice and apple in every bite.
Print
Apple Pie Cupcake with Cinnamon Nutmeg Frosting Recipe
- Prep Time: 20 minutes
- Cook Time: 20 minutes
- Total Time: 40 minutes
- Yield: 12 cupcakes
- Category: Dessert
- Method: Baking
- Cuisine: American
Description
Delight in these Apple Pie Cupcakes that combine the warm, comforting flavors of classic apple pie with the convenience and fun of cupcakes. Featuring a moist, cinnamon-spiced cake base and a luscious apple pie filling topping, these cupcakes are finished with a creamy cinnamon nutmeg butter frosting, perfect for any occasion or dessert craving.
Ingredients
Cupcake Batter
- 1 1/4 cups all-purpose flour
- 1 1/4 teaspoons baking powder
- 1/4 teaspoon baking soda
- 1/4 teaspoon salt
- 1/2 teaspoon ground cinnamon
- 1/2 cup unsalted butter, softened
- 1 cup granulated sugar
- 2 large eggs
- 1 teaspoon vanilla extract
- 1/2 cup milk
- 1 cup apple pie filling, homemade or store-bought, finely chopped
- 1 teaspoon lemon juice
Topping
- 1/2 cup unsalted butter, softened
- 1 cup confectioners’ sugar
- 1 teaspoon ground cinnamon
- 1/4 teaspoon nutmeg
- 1 tablespoon milk
Instructions
- Preheat Oven and Prepare Pan: Preheat your oven to 350°F (175°C) and line a muffin tin with cupcake liners to prevent sticking and make removal easy.
- Mix Dry Ingredients: In a medium bowl, whisk together the all-purpose flour, baking powder, baking soda, salt, and ground cinnamon until evenly combined.
- Cream Butter and Sugar: Using an electric mixer in a large bowl, cream the softened unsalted butter with granulated sugar until light and fluffy, which helps to incorporate air for a tender crumb.
- Add Eggs and Vanilla: Beat in the eggs, one at a time, ensuring each is fully incorporated before adding the next. Then stir in the vanilla extract for flavor.
- Combine Dry and Wet Ingredients: Gradually add the flour mixture to the butter mixture alternately with the milk, starting and ending with the flour mixture. Mix only until just combined to avoid overmixing.
- Prepare Apple Filling: In a small bowl, mix the finely chopped apple pie filling with lemon juice to prevent the apples from browning and to add a subtle tartness.
- Fill Cupcake Liners: Spoon the batter into the cupcake liners, filling each about two-thirds full for room to rise, then top each with a spoonful of the prepared apple pie filling.
- Bake Cupcakes: Bake the cupcakes for 18 to 20 minutes or until a toothpick inserted in the center comes out clean. Allow them to cool in the pan for 5 minutes before transferring to a wire rack to cool completely.
- Make Cinnamon Nutmeg Butter Topping: Beat the softened butter until creamy, then gradually add the confectioners’ sugar, cinnamon, and nutmeg. Beat in milk until the frosting is smooth and spreadable.
- Frost Cupcakes: Once the cupcakes have fully cooled, spread a generous layer of the cinnamon nutmeg butter over the top of each cupcake.
- Optional Garnish: Add a decorative slice of fresh apple or a sprinkle of ground cinnamon atop the frosting to enhance presentation and flavor.
Notes
- You can use store-bought apple pie filling for convenience or make your own for a fresher taste.
- Ensure cupcakes are completely cool before frosting to prevent the buttercream from melting.
- For a dairy-free version, substitute the butter and milk with plant-based alternatives.
- These cupcakes can be stored in an airtight container at room temperature for up to 2 days or refrigerated for 4 days.
- Adding a pinch of nutmeg and cinnamon to the batter enhances the classic apple pie flavor.
